Best Sourdough Discard Chocolate Chip Cookies
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These chewy sourdough chocolate chip cookies have crisp edges, gooey centers, and the right hint of tang from sourdough starter discard. They are made with simple ingredients, and plenty of milk chocolate for that nostalgic, classic chocolate chip cookie flavor.

Recipe Overview: Best Sourdough Discard Chocolate Chip Cookies
- ⏱ Prep Time: 20 minutes
- 🚨 Chill Time: 1 day
- 👩🏻🍳 Baking Time: 12 minutes
- ⏳ Total Time: 1 day 32 minutes
- 🍞 Serving: 24 cookies
- ⚡ Calories: 281 calories per cookie
- 🍂 Flavor Profile: Chewy cookies with crisp edges, gooey centers, plenty of chocolate, and a subtle tang from sourdough discard.
- 👌 Difficulty: Easy — straightforward to mix and bake.
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My family is a huge fan of my sourdough chocolate sandwich cookie recipe and my oatmeal sandwich cookie recipe, but those require a bit more work so this is one that I can comes together quicker for them. Each bite has that buttery, homemade chocolate chip cookie feel, with melty pockets of chocolate and a deeper flavor that makes them especially hard to stop eating.
If you keep a jar of sourdough starter in your fridge like I do, this sourdough chocolate chip cookie recipe is one you will make again and again. Because let’s be honest, most of us are not looking for a cookie that is wildly creative. We are looking for the one that makes everyone reach for “just one more.” That is exactly what these sourdough discard chocolate chip cookies do.
Jump to:
- Recipe Overview: Best Sourdough Discard Chocolate Chip Cookies
- 🌟 Why you will love this recipe:
- Key Ingredients:
- Variations
- How to make Sourdough Discard Chocolate Chip Cookies
- Storage and Freezing
- Troubleshooting Sourdough Discard Chocolate Chip Cookies
- Sourdough Chocolate Chip Cookie FAQ's
- More Homemade Sourdough Treats
- Best Sourdough Discard Chocolate Chip Cookies
🌟 Why you will love this recipe:
• Rich flavor without tasting sour. The sourdough discard adds depth and balances the sweetness of the milk chocolate and brown sugar.
• Chewy centers and crisp edges. These cookies have that soft, gooey middle with just the right amount of crispness around the edges.
• A great way to use extra discard. Instead of tossing it, you get a cookie that actually feels worth making. If you love baking with discard, my sourdough chocolate chip banana bread and sourdough oatmeal sandwich cookies are two more favorites worth making.
• Simple ingredients, bakery style results. These are made with basic staples but bake up thick, rich, and full of flavor
Key Ingredients:

Sourdough Starter Discard
This recipe uses unfed sourdough starter discard, not active sourdough starter. The hydration starter should be thick, not watery. Too much water content can cause spreading.
Butter
Use unsalted butter at room temperature. Do not use melted butter. Proper creaming gives the best results.
Egg Yolks Only
Using egg yolks instead of a whole egg creates chewy cookies with gooey centers and avoids a cake-like cookie texture.
Milk Chocolate
Milk chocolate keeps these soft and sweet. You can substitute chocolate chunks or dark chocolate chips next time if you prefer less sweetness.
Get the full list of ingredients and measurements on the printable recipe card below.
Variations
• Add M&M’s for a monster cookie twist. Swap part of the chocolate chips for M&M’s or press a few into the tops before baking. If you love that kind of flavor combo, my Monster Cookie Protein Bark is another fun treat to try, and it's even no-bake!
• Make them mint chocolate chip. Swap some of the chocolate chips for chopped mint chocolate or mint baking chips for a cool minty twist.
• Add chopped nuts. A handful of chopped pecans or walnuts adds a little crunch and pairs well with the buttery cookie dough.

How to make Sourdough Discard Chocolate Chip Cookies
Step 1: Melt the butter in a small saucepan or microwave safe bowl. Let it cool for 10 to 15 minutes.
Step 2: In a separate bowl, whisk together the flour, cornstarch, baking soda, and salt.
Step 3: Add the brown sugar and white sugar to the melted butter. Whisk until smooth and fully combined.
Step 4: Add the egg yolks, sourdough discard, and vanilla. Whisk until the mixture is thick and smooth.
Step 5: Add the dry ingredients and stir just until no dry flour remains.


Step 6: Fold in the chocolate chips. At this point you can do an overnight fridge ferment.
Step 7: Scoop the chilled dough onto a parchment lined baking sheet, I prefer mine portioned to weigh 70 grams which is large. Press a few more chocolate chips into the top.
Step 8: Bake at 375°F for 11 to 13 minutes, until the edges are set and the centers still look slightly soft.
Step 9: Let the cookies cool on the pan for 5 minutes before moving them to a cooling rack.


Storage and Freezing
Store baked cookies in an airtight container for up to 4 days.
To freeze:
- Roll balls of cookie dough
- Place in a freezer-safe bag
- Bake from frozen, adding 1 to 2 extra minutes
Troubleshooting Sourdough Discard Chocolate Chip Cookies
Even the best sourdough discard chocolate chip cookies can go wrong if small details shift. Here’s how to fix the most common issues.
Why are my cookies dry or crumbly?
Possible causes:
• Too much flour
• Overbaking
• Oven temperature too high
Fix for next time:
Spoon and level your all purpose flour instead of scooping directly from the bag. Pull cookies when centers still look slightly underdone. They finish cooking on the cookie sheet.
Why are my sourdough cookies cakey instead of chewy?
Possible causes:
• Used a whole egg instead of egg yolks
• Too much baking powder
• Not enough chill time
Egg yolks create rich, chewy cookies. Using egg whites or a whole egg can make them more cake-like.
Why do my cookies taste too sour?
Possible causes:
• Very old discard
• Highly acidic starter
• Long fermentation in a warm environment
Fix:
Use discard that is less than a week old and has been stored in the fridge. The dough should ferment in the refrigerator, not at room temperature.
Sourdough Chocolate Chip Cookie FAQ's
Sourdough starter discard is the portion of starter you remove before feeding it. It is unfed, slightly tangy, and perfect for sourdough discard recipes like Sourdough Lemon Blueberry Scones, Sourdough Dutch Oven Pancake, and Sourdough Eggnog Muffins.
Chilling cookie dough allows the flour to fully hydrate and improves flavor. An overnight dough ferment creates chewy cookies with crisp edges and gooey centers.
To prevent spreading:
Use room temperature butter, not melted butter
Chill the dough at least 24 hours
Bake on a parchment-lined baking sheet
Measure flour accurately
Bake at 350 degrees until edges are golden brown but centers look slightly underdone. Let cookies cool on the cookie sheet for 5 minutes before transferring to a wire rack.

More Homemade Sourdough Treats
Looking for other yummy sourdough recipes? Try these:
If you tried this Sourdough Chocolate Chip Cookie or any other recipe on my website, please leave a 🌟 star rating and let me know how it went in the 📝 comments below. I love hearing from you!

Best Sourdough Discard Chocolate Chip Cookies
Equipment
- 1 Stand mixer
- 1 Paddle attachment
- 1 cookie scoop
- 1 Baking sheet
Ingredients
- 1 cup unsalted butter
- 1 ¼ cups brown sugar
- ½ cup white sugar
- 2 egg yolks
- ½ cup sourdough starter discard
- 2 teaspoon vanilla extract
- 2 ⅔ cups all purpose flour
- 1 tablespoon cornstarch
- 1 teaspoon baking soda
- 1 teaspoon sea salt
- 2 cups chocolate chips
- Flaky sea salt optional
Instructions
- Melt the butter in a small saucepan or microwave safe bowl. Let it cool for 10 to 15 minutes.
- In a separate bowl, whisk together the flour, cornstarch, baking soda, and salt.
- Add the brown sugar and white sugar to the melted butter. Whisk until smooth and fully combined.
- Add the egg yolks, sourdough discard, and vanilla. Whisk until the mixture is thick and smooth.
- Add the dry ingredients and stir just until no dry flour remains.
- Fold in the chocolate chips.
- Portion each cookie into 70 gram dough balls. Roll smooth, press a few extra chocolate chips on top, then chill before baking.
- Refrigerate the dough for at least 2 hours.
- Place dough balls onto a parchment lined baking sheet with plenty of space to spread.
- Bake at 375°F for 11 to 13 minutes, until the edges are set and the centers still look slightly soft.
- Let the cookies cool on the pan for 5 minutes before moving them to a cooling rack.
Notes
This recipe uses unfed sourdough starter discard, not active sourdough starter. The hydration starter should be thick, not watery. Too much water content can cause spreading. Don't skip chilling the dough. Chilling the dough helps the cookies keep a thicker shape instead of turning out flat. Before baking the full batch, bake one chilled dough ball to check the spread.









You will LOVE these cookies!